PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000034.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 422aa    MW: 46532.6 Da    PI: 8.6636
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-19219268356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+ta eAa a++ a+  l+ge
  XP_023000034.1 219 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAVEAAIAYDTAAYMLRGE 268
                     8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MADQFPLIEE LKNIIPKGIS SSSSSSFEEF VSGYYFHGDP ILWSSIARAS CSENGDSTGN  60
DQSKSPSSSS SSSSSFRLFS SEKSEISGGN LIENFRGIRK FESNLHPDGD GFVPVNFLEA  120
SPTLFQARTD STNLTLFLQE SAIVDPSPRN PFQIQAQNGL QWLKNNHNQS QAAAIAAVSS  180
RNYSDFWLGA TKTQPMKQSG RKQGNHKTES TATAVGKLFR GVRQRHWGKW VAEIRLPRNR  240
TRVWLGTFDT AVEAAIAYDT AAYMLRGEFA HLNFPDQKHR LKSNSLNRTT AALLEAKLKT  300
ISQENTSRKK TATSTIAATT TIPTIDSSSS EKRSNLSQNP MWISPENMSG IGGNNGGSET  360
GELKRNPDEI FEIEQHLQLS TTPSLDMDTI WDALRRVLQT LSGSKEAEPQ RSGHKVMCQQ  420
GD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-55ERF family protein