PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000058.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 664aa MW: 73336.4 Da PI: 6.2752

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000058.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.8	1.2e-28	205	258	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_023000058.1 205 KPRVVWSVELHQQFVAAVKQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 258 79*****************.******************************8 PP
2	Myb_DNA-binding	43.3	8.2e-14	207	257	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v avkqlG + +k+I + m+ g+t++++ s++qky+ XP_023000058.1 207 RVVWSVELHQQFVAAVKQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 257 678***********************************************7 PP
3	Response_reg	71.7	3.1e-24	27	135	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y v+ + +e al +l+e++ +D++l D+ mp+m+G++ll++ e +lp+i+++a + ++ + + + G XP_023000058.1 27 VLVVDDDPTCLRILEKMLQNCCY-AVTKCNRAEIALSMLRENKngFDIVLSDVHMPDMNGFKLLEQVGLEM-DLPVIMMSADDGKNVVMKGVIHG 119 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l++ XP_023000058.1 120 ACDYLIKPVRIEALRN 135 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MDLSHMKGSM PTPTSMVSDQ FPAGLRVLVV DDDPTCLRIL EKMLQNCCYA VTKCNRAEIA 60 LSMLRENKNG FDIVLSDVHM PDMNGFKLLE QVGLEMDLPV IMMSADDGKN VVMKGVIHGA 120 CDYLIKPVRI EALRNIWQHV VRKRKTEWKD LEQSGSVDDG DREKNPSEGA NYSSSVYEGS 180 WNSSKRRRDT EEEAEERDDT STLKKPRVVW SVELHQQFVA AVKQLGIDKA VPKKILELMN 240 VPGLTRENVA SHLQKYRLYL RRLSGVSSSH SLQCNLNNSF MNPQDPPFGP MASFNGIDLQ 300 TLSVTGHLSP QSLAALQATE FRRPAAAKSS MSMALVDQNN LFSFKNPKLR FVEDQTPHLS 360 NRKPINLFHG IPTKMEPKQP AIMHPSVQTQ GNINMPLNIK TEHGATQLMH HLSHQQTGGQ 420 AVSNSPASHL PRISSSFPII SGSITSRNGT ADSTQGPGYN LVSPASLMMN FPMNQLTELS 480 NNFSLPSDST VSTLTCKGVF QEEISSDLHG SDGLMSSYDV FSDLHLQKSH DWDSHNVGSL 540 AFGTSHHGNF IQDSFDVSPS TLIHHGFPSS QTNGQNHNSS SAGKTIFPFS DATQPENAQS 600 NAEKLPLDPG DVKPQRIPDA SYQTDLLSEN FGQDELLSVF LKQEQQGDNG SVDFSGYQTE 660 NICV

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MDLSHMKGSM PTPTSMVSDQ FPAGLRVLVV DDDPTCLRIL EKMLQNCCYA VTKCNRAEIA  60
LSMLRENKNG FDIVLSDVHM PDMNGFKLLE QVGLEMDLPV IMMSADDGKN VVMKGVIHGA  120
CDYLIKPVRI EALRNIWQHV VRKRKTEWKD LEQSGSVDDG DREKNPSEGA NYSSSVYEGS  180
WNSSKRRRDT EEEAEERDDT STLKKPRVVW SVELHQQFVA AVKQLGIDKA VPKKILELMN  240
VPGLTRENVA SHLQKYRLYL RRLSGVSSSH SLQCNLNNSF MNPQDPPFGP MASFNGIDLQ  300
TLSVTGHLSP QSLAALQATE FRRPAAAKSS MSMALVDQNN LFSFKNPKLR FVEDQTPHLS  360
NRKPINLFHG IPTKMEPKQP AIMHPSVQTQ GNINMPLNIK TEHGATQLMH HLSHQQTGGQ  420
AVSNSPASHL PRISSSFPII SGSITSRNGT ADSTQGPGYN LVSPASLMMN FPMNQLTELS  480
NNFSLPSDST VSTLTCKGVF QEEISSDLHG SDGLMSSYDV FSDLHLQKSH DWDSHNVGSL  540
AFGTSHHGNF IQDSFDVSPS TLIHHGFPSS QTNGQNHNSS SAGKTIFPFS DATQPENAQS  600
NAEKLPLDPG DVKPQRIPDA SYQTDLLSEN FGQDELLSVF LKQEQQGDNG SVDFSGYQTE  660
NICV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-162	ARR-B family protein