PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000365.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 391aa MW: 44925.3 Da PI: 4.5544

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46	1.3e-14	154	238	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e+ +L++a e+ + +r++l+ W+ev++k++e ++er +qC+++++ l+k+ykk+k + + +s+s+++yf++l+ XP_023000365.1 154 WNEHETVVLLDAWGERFLQHGRKSLRSEEWQEVAEKVSEvSKIERMDTQCRNRLDTLKKKYKKEKSKSTEI-GGSTSKWVYFKKLD 238 ***********************************762678********************9997.78889*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MDDDSGEERY PLSKRYSGNH RESYSSVPFP KVPLRDAPYS RPVSNHYVED DVEDDDEEDE 60 GLGEEDDEND QNNGFAHTSD EVDDGDDEDD YDMDEDNKQN STVKLDADLE RHPKKRRLKS 120 LASSYELAPR VPAPSSVTPA QKLFVGGRNS LMDWNEHETV VLLDAWGERF LQHGRKSLRS 180 EEWQEVAEKV SEVSKIERMD TQCRNRLDTL KKKYKKEKSK STEIGGSTSK WVYFKKLDML 240 MSSPPNQGGL SCGLDSGEYV FMNPRAYLNR ANGFDEMRDS PENSESDDDE DDELDGLPPK 300 KRMYGRNRCD GTSFRMLAIS IHKFSEIYEK IESSKRHQMI ELEKMRMDFL RDLELQKRHI 360 MERAQAEIAK LKQGDNNDDG DCSAPAKSTN G

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MDDDSGEERY PLSKRYSGNH RESYSSVPFP KVPLRDAPYS RPVSNHYVED DVEDDDEEDE  60
GLGEEDDEND QNNGFAHTSD EVDDGDDEDD YDMDEDNKQN STVKLDADLE RHPKKRRLKS  120
LASSYELAPR VPAPSSVTPA QKLFVGGRNS LMDWNEHETV VLLDAWGERF LQHGRKSLRS  180
EEWQEVAEKV SEVSKIERMD TQCRNRLDTL KKKYKKEKSK STEIGGSTSK WVYFKKLDML  240
MSSPPNQGGL SCGLDSGEYV FMNPRAYLNR ANGFDEMRDS PENSESDDDE DDELDGLPPK  300
KRMYGRNRCD GTSFRMLAIS IHKFSEIYEK IESSKRHQMI ELEKMRMDFL RDLELQKRHI  360
MERAQAEIAK LKQGDNNDDG DCSAPAKSTN G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	119	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-67	Trihelix family protein