PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000370.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 340aa MW: 37650.8 Da PI: 6.2938

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.7	4.1e-08	252	292	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_023000370.1 252 ARQRRERISERIRVLQRLVPGG-----DKMDTASMLDEAANYLKFL 292 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MDYLNRDGYR SRVATTNMTS PVSFWSNYQQ GVEERFMISN SNSHFFNSVQ DLPMSPPLTS 60 FATSKDMDAI APYGFDDGKS TSVTACSLES LDCLLSATNS NTDTSVEDND GSVPMILTDY 120 TNLWNFGSNA ATTKRTHQES TDYSVFSNTI KNLSNSTSNS GGFRIITDQN QPKSKKPRSE 180 KPPSSSNINF QQSCSSGSSC IDQEPDPEAI AQMKEMIYRA AALRPVNLGV EGIEKPKRKN 240 MRISTDPQTV AARQRRERIS ERIRVLQRLV PGGDKMDTAS MLDEAANYLK FLKSQIKALE 300 NLGQKIESLN CPSTSLAFSF NPSFPIQSSS SLSHDQFPQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	258	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	9e-58	bHLH family protein