PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000428.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 250aa MW: 25229.5 Da PI: 7.5024

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	131.9	2.6e-41	32	133	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r+da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael XP_023000428.1 32 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAEL 126 7*********************9989*************************************************************** PP DUF260 95 allkeel 101 ++l+++l XP_023000428.1 127 SYLQAQL 133 99885 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MSANPSTSGG GSGGGGGGGV GGGLGSGGGG GPCGACKFLR RKCVPGCIFA PYFDSEQGAA 60 HFAAVHKVFG ASNVSKLLLH IPIHKRPDAV VTICYEAQAR LRDPVYGCVS HIFALQQQVV 120 SLQAELSYLQ AQLASLELPS PPNPPPPPPP PSFQGVPPLS ISDLPSPPSL PATYDLSSLF 180 DPMAQPAWVL PQQRLDPRQF TGGGGGGGGG GSGLSTVAGE GDLQALAREL LHRHGAPPSS 240 DSSSPPSVSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	7e-68	LBD family protein