PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000537.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 263aa    MW: 28807.3 Da    PI: 7.1261
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18186220135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  XP_023000537.1 186 CLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRL 220
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MESSLAFMDD LLDFSSDIGE EDEEDDVVPP RSSTAADSSE FNAGSLPDDT SSGRILLEDC  60
GEEELEWLSN EDAFPAVSTF VDILSDHHHH PPPPLTMVSK QNSPVSVLES SSVSSHSETN  120
STKSSSHGSV LMSCCVGLKV PSKARSKRRR GRHISGHHLW FKQQPSSRNV KQVVPTTTTT  180
AIGRKCLHCG AEKTPQWRAG PLGPKTLCNA CGVRFKSGRL VPEYRPASSP TFSPVLHSNS  240
HRKVMEMRRQ KQLSMVVNPM DKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.13e-57GATA family protein