PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000539.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 255aa    MW: 29006.2 Da    PI: 10.0527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27.2e-0991136454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h  +Er RR++ + +++eL ++lP+      +K++K +i+++A + I +L
  XP_023000539.1  91 QHMLNERMRREKHRRSYSELHSMLPSK-----TKNDKNSIVQMAARTIEEL 136
                     58899*********************9.....8***************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDDGFPVEFW HTDLYWLDTP ISVSDPAPGQ ISAFVPYLPQ PAIGSGQKNN PIAATYSENI  60
HKRVIKYWRK KWQEKKKPAE MGDLEREKSH QHMLNERMRR EKHRRSYSEL HSMLPSKTKN  120
DKNSIVQMAA RTIEELKASE GMLKKRNIEL EMALSAKKRK QEKGTTPIRV AVANPSSGIN  180
SMLGVLNLLK TVGVNAKAIH ATFLDSQFST HIAIESHMRA AEVERALQMT LSEAERKFQR  240
QCEEGSHDVK DGSTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198105MRREKHRR
2144160KKRNIELEMALSAKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.19e-33bHLH family protein