PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000542.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 251aa MW: 28395.7 Da PI: 8.352

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l + v+ +G +W++ ++ g+ R++k+c++rw +yl XP_023000542.1 14 RGPWSPEEDRILTNFVQDHGHTNWRALPKQAGLLRCGKSCRLRWTNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	52.6	1.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_023000542.1 67 RGNFTKEEEDAIINLHELLGNR-WSAIAAKLP-GRTDNEIKNLWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGRAPCCEKM GLKRGPWSPE EDRILTNFVQ DHGHTNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TKEEEDAIIN LHELLGNRWS AIAAKLPGRT DNEIKNLWHT HLKKRLQKPI 120 KTTPPKSKNK TKKQTKSNSS SNYSSSMAIT NQTHLPICSS SMSPSQQSST SEICSSLTTD 180 ASMAENEYYS YTADDTAAPL LIDESFWSDA AENYNPNSDS SSSYYNEENK DMEFWYNVFV 240 KAGGIPGLPE F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	4e-78	MYB family protein