PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000546.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 228aa    MW: 25786.6 Da    PI: 4.8669
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-1888139256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_023000546.1  88 SYRGVRRRP-WGKFAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFSMRGA 139
                     69*******.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MTSSLFHCQD SDFSPESSLS SFESLRWEAF QTNDNSLLFN ENDSGEMLLH NLISEPTSYP  60
PANSLRQDPI KEEEVDSLGE EEPHKPKSYR GVRRRPWGKF AAEIRDSTRH GVRVWLGTFD  120
SAEAAALAYD QAAFSMRGAA AVLNFPVERV QESLKEMEMI NSAAYGGDGE SPVVALKRKH  180
SMRNKSRRRK SKNKEDIGKT ESNVVVLEDL GSDYLEELLE LSENLRPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186191SRRRKS
2187192RRRKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-40ERF family protein