PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000938.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 329aa    MW: 36663.3 Da    PI: 6.7905
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.6e-10164211455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++ +L++l+P +    +k   Ka +L + ++Y++sLq
  XP_023000938.1 164 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 211
                     8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAAFSYQYQP VLLDSMFFPN NSYKMGGFLD DPNFNTNCFS QFQEEQQQPI YHFPDISNQT  60
PESSTLVDRS DSADPPAVTV TVTSPCSKKR KSRNTSSATS AHSKGTTETT AKKQKSKVEL  120
DEHKEGDPKP KNGKKEEKKA SEEDGAATKG YIHVRARRGQ ATDSHSLAER VRREKISERM  180
KTLQRLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LASLNPIFFD FRMDLDGLMI  240
QPETPSLSSI TPQLPVIDTT PTPAISAPNN FPLMDPSANS MFLLQPGMSP AAYSPSSQDY  300
VKVSSWDVEE QKRKLLISSG IGDNLCYFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
188117KKRKSRNTSSATSAHSKGTTETTAKKQKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-53bHLH family protein