PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001000.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 275aa    MW: 29930.1 Da    PI: 5.1856
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.7e-3079137259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+ver++ dp+++ itY+ eHnh+
  XP_023001000.1  79 SDSWAWRKYGQKPIKGSPYPRAYYRCSSSkGCPARKQVERNRLDPTMLLITYSCEHNHS 137
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDDVTFNNNH QFYSVDLLED SDEFKAAPDS PPPPPPPPLP PNSTAAAKKG RRGMKKKVVS  60
VRINGDGPRN SSGSTTPPSD SWAWRKYGQK PIKGSPYPRA YYRCSSSKGC PARKQVERNR  120
LDPTMLLITY SCEHNHSGPV SRNNNHHQAA AVKPTSPETV PVHPEPEPEA EEKFVESLED  180
QFSWFGEMET TSSTVLESSI FSGRSSSGVG DSISSDVAMP FPMGDDDVDD SLFADLGELP  240
ECSVVFRHGG GPGLPVDEQP ATSQRRITPW CGATT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-55WRKY family protein