PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001035.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 556aa MW: 61162.7 Da PI: 8.5728

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.2	5.1e-17	251	300	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr l+P++ ++K +Ka+ L ++veYI+ Lq XP_023001035.1 251 RSKHSATEQRRRSKINDRFQMLRGLIPHS----DQKKDKASFLLEVVEYIQFLQ 300 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MELPQPRPFG AEGSKSTHDF LSLYTHSSPQ LDPRPSSQGG YLKTHDFLEP QERKRKASSK 60 KEINVERPPP PVPTTSVEHF LPGGIGTFSI SQVSYFDQRT LPKPEGSVFT GARSSSSGER 120 NDENSNGSGF TLWEEYAVKK GKTGKENILG DRPHEPRAST SQWTASMERP SQSSSNNHHN 180 AFSCFSSSQP RGKKNPSFME MLKSAKSNSQ DEELDDDGDV VIKKEISTAN KGELRIKVDG 240 NSSDQKANTS RSKHSATEQR RRSKINDRFQ MLRGLIPHSD QKKDKASFLL EVVEYIQFLQ 300 EKVQKYEGSY HEWNREIAKL MPLRNNQRSA DGYNDQSRGV DSGPGPALVF SANFVEKNAA 360 LSPLVPGSSH NAVDSDTSSA TTLKAVDHHP GRTNNVVPFP MSIPPKLYAP TRDGTVVPQA 420 SRPLSSDTDH PSSQSQILSY QARCYNNDAA VASELQKEQD LTIEGGTVNI SSVYSQGLLN 480 SLTHALQSSG VDLSQARISV QIELGELANR RSTAPSSIVK DINIPINDME TIHTRVSAAE 540 DSERATKKLK TVKSLV

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MELPQPRPFG AEGSKSTHDF LSLYTHSSPQ LDPRPSSQGG YLKTHDFLEP QERKRKASSK  60
KEINVERPPP PVPTTSVEHF LPGGIGTFSI SQVSYFDQRT LPKPEGSVFT GARSSSSGER  120
NDENSNGSGF TLWEEYAVKK GKTGKENILG DRPHEPRAST SQWTASMERP SQSSSNNHHN  180
AFSCFSSSQP RGKKNPSFME MLKSAKSNSQ DEELDDDGDV VIKKEISTAN KGELRIKVDG  240
NSSDQKANTS RSKHSATEQR RRSKINDRFQ MLRGLIPHSD QKKDKASFLL EVVEYIQFLQ  300
EKVQKYEGSY HEWNREIAKL MPLRNNQRSA DGYNDQSRGV DSGPGPALVF SANFVEKNAA  360
LSPLVPGSSH NAVDSDTSSA TTLKAVDHHP GRTNNVVPFP MSIPPKLYAP TRDGTVVPQA  420
SRPLSSDTDH PSSQSQILSY QARCYNNDAA VASELQKEQD LTIEGGTVNI SSVYSQGLLN  480
SLTHALQSSG VDLSQARISV QIELGELANR RSTAPSSIVK DINIPINDME TIHTRVSAAE  540
DSERATKKLK TVKSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-103	bHLH family protein