PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001048.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 224aa MW: 25092.8 Da PI: 10.1841

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	87.9	2.2e-27	53	160	3	91
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaess 78 g+kdrhsk++T +g+RdRR+Rlsa++a++++dLq++LG+ ++sk i+WL+ i++l+ + + XP_023001048.1 53 GGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLhfpkdfdpnasflhhfdiaD-----------A 136 78*************************************************************66663332222222222110...........1 PP TCP 79 sssasnsssg...............kaa 91 +a+ + ++a XP_023001048.1 137 AAKAK----HeetgmlllqksspspNHA 160 11111....1111233332222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MTGRVNNMIS KLKQEGVHVE AKQMEGKRKK GPSRQGPFLR GNPRIFRVSP LFGGKDRHSK 60 VCTMKGLRDR RIRLSAPTAI QLYDLQNRLG LSQPSKVIDW LMDVTRFDID KLPPLHFPKD 120 FDPNASFLHH FDIADAAAKA KHEETGMLLL QKSSPSPNHA SFSALQLQTN AMTENCCHFD 180 PPSFPFPLMD QANPASFSSP SEQLLFRPLT MPPEVSSYLP NGGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	4e-41	TCP family protein