PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001132.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 564aa MW: 62746.4 Da PI: 8.5713

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.6	4.6e-18	266	315	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++LrellP + ++K +Ka+ L +++eYI+ Lq XP_023001132.1 266 RSKHSATEQRRRSKINDRFQKLRELLPCS----DQKRDKASFLLEVIEYIQFLQ 315 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC 60 AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP 120 VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRA EPPAKMEQWA 180 VSTERPIQSS CSSFSSLSSS QPSCQQKRSF GEMLKSAANV TSKEEKLDDG KAFVIKKESS 240 PSTAYRGDLR INVGGKCSDQ KANTPRSKHS ATEQRRRSKI NDRFQKLREL LPCSDQKRDK 300 ASFLLEVIEY IQFLQEKVRK YESSPPQGWY DEPAKLLHCR NNCNPAQCYI DQSQVAKSGP 360 VFIFAGSDQK NMSHFPAFLP RCSHNPVESN TSTTFGEADH HLGTTNKATS YPMLDPRYFI 420 PVTSEGEKTK IYSQVAHNAD KKPYEMQQLL WETRACTTDI AAVDNKLKEP EQSIEGGRIS 480 ISSAYSQELL KILTQALQSS GVDMSQASIA VQIELGKRTN CRDTAANPAI VDDSARPSER 540 AVVVSRVAAV EEDMEQAFRK KQNT

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC  60
AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP  120
VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRA EPPAKMEQWA  180
VSTERPIQSS CSSFSSLSSS QPSCQQKRSF GEMLKSAANV TSKEEKLDDG KAFVIKKESS  240
PSTAYRGDLR INVGGKCSDQ KANTPRSKHS ATEQRRRSKI NDRFQKLREL LPCSDQKRDK  300
ASFLLEVIEY IQFLQEKVRK YESSPPQGWY DEPAKLLHCR NNCNPAQCYI DQSQVAKSGP  360
VFIFAGSDQK NMSHFPAFLP RCSHNPVESN TSTTFGEADH HLGTTNKATS YPMLDPRYFI  420
PVTSEGEKTK IYSQVAHNAD KKPYEMQQLL WETRACTTDI AAVDNKLKEP EQSIEGGRIS  480
ISSAYSQELL KILTQALQSS GVDMSQASIA VQIELGKRTN CRDTAANPAI VDDSARPSER  540
AVVVSRVAAV EEDMEQAFRK KQNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	6e-92	bHLH family protein