PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001133.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 563aa MW: 62675.3 Da PI: 8.5713

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.6	4.6e-18	265	314	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++LrellP + ++K +Ka+ L +++eYI+ Lq XP_023001133.1 265 RSKHSATEQRRRSKINDRFQKLRELLPCS----DQKRDKASFLLEVIEYIQFLQ 314 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC 60 AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP 120 VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRE PPAKMEQWAV 180 STERPIQSSC SSFSSLSSSQ PSCQQKRSFG EMLKSAANVT SKEEKLDDGK AFVIKKESSP 240 STAYRGDLRI NVGGKCSDQK ANTPRSKHSA TEQRRRSKIN DRFQKLRELL PCSDQKRDKA 300 SFLLEVIEYI QFLQEKVRKY ESSPPQGWYD EPAKLLHCRN NCNPAQCYID QSQVAKSGPV 360 FIFAGSDQKN MSHFPAFLPR CSHNPVESNT STTFGEADHH LGTTNKATSY PMLDPRYFIP 420 VTSEGEKTKI YSQVAHNADK KPYEMQQLLW ETRACTTDIA AVDNKLKEPE QSIEGGRISI 480 SSAYSQELLK ILTQALQSSG VDMSQASIAV QIELGKRTNC RDTAANPAIV DDSARPSERA 540 VVVSRVAAVE EDMEQAFRKK QNT

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC  60
AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP  120
VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRE PPAKMEQWAV  180
STERPIQSSC SSFSSLSSSQ PSCQQKRSFG EMLKSAANVT SKEEKLDDGK AFVIKKESSP  240
STAYRGDLRI NVGGKCSDQK ANTPRSKHSA TEQRRRSKIN DRFQKLRELL PCSDQKRDKA  300
SFLLEVIEYI QFLQEKVRKY ESSPPQGWYD EPAKLLHCRN NCNPAQCYID QSQVAKSGPV  360
FIFAGSDQKN MSHFPAFLPR CSHNPVESNT STTFGEADHH LGTTNKATSY PMLDPRYFIP  420
VTSEGEKTKI YSQVAHNADK KPYEMQQLLW ETRACTTDIA AVDNKLKEPE QSIEGGRISI  480
SSAYSQELLK ILTQALQSSG VDMSQASIAV QIELGKRTNC RDTAANPAIV DDSARPSERA  540
VVVSRVAAVE EDMEQAFRKK QNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	2e-89	bHLH family protein