PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001346.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Dof
Protein Properties Length: 406aa    MW: 44437.8 Da    PI: 8.1632
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.95.3e-39103163262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     ++k l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG +rnvPvG+grrk+k+s 
  XP_023001346.1 103 PDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSA 163
                     78999****************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MLDCKDPAIK LFGRNIPLSD DVEAPAVHSH DFSSEKHAEP RKDASVDDLE KPVDGSDDSR  60
NLECGQEGSV NPKTPSIDEE TARPINGEPE SERLNSERTP KKPDKLLPCP RCKSMDTKFC  120
YYNNYNVNQP RHFCKACQRY WTAGGIMRNV PVGAGRRKSK NSASYYRHIT ISEALEAAEI  180
EASNGTHKPK FIGNCGRVLS FNLDAPSSIP KGCDKSSSLS SMAVQTPSEL KTNGFPSQIS  240
CLSGVPWPLV WNSTVSPPFG PPGFPFSFLP ATTWSCGVPG PWNTPWFSPQ DSTEQKSKAS  300
PTLGKHQRDN EMAKEDAISS KEEGVKQRNG CVLTPKTLRI DDPSEAAKSS IWATLGIKNE  360
SMSGGRNLFK PFQPKGHEKV PVSKNASVLQ ANPAAFSRSL VFHESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62430.13e-71Dof family protein