PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001347.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 312aa    MW: 34723.9 Da    PI: 7.3817
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +++q+G+g+W++++   g+ R+ k+c++rw +yl
   XP_023001347.1 15 KGPWTPEEDISLVSYIQQHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 62
                     79******************************99************97 PP
2Myb_DNA-binding49.11.3e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  Ed+ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_023001347.1  68 RGNFTDHEDKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMGRPPCCEK VGVKKGPWTP EEDISLVSYI QQHGPGNWRS VPTNTGLLRC SKSCRLRWTN  60
YLRPGIKRGN FTDHEDKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKRV  120
QSGTDGGAQD RFTPSQTSTL CKGQWERRLQ TDIHTAKRAL CEALSLDKQN PFGIIEDSKP  180
QTDNPILQSP PPPPPPTTTT SPYASSAENI ARLLENWMKK SPEKSSEITT QACVSEGSQS  240
ATNCNNSPDG PTLDDSSCFL NFNNTSSTST ANQEVPLTFL EKWLFDDAAL ANVHADQDFV  300
SVSLEAQTEG LF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.11e-106MYB family protein