PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001757.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SBP
Protein Properties Length: 155aa    MW: 17039.8 Da    PI: 8.4918
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.13.3e-4071147278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cq+++C+adls+ k+yh rhkvCe+h+ka +v+v+g++qrfCqqCsrfh l+efDe+krsCr+rLa+hn+rrrk+++
  XP_023001757.1  71 CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSS 147
                     **************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MATGKADGKR RLNYYDMEEE EEEEEEVEVV DGELGFGGDF NKKKKTLSSG GGSNKKSGSG  60
YGGAATAAPS CQADNCNADL SSSKRYHCRH KVCEFHAKAL AVMVAGIHQR FCQQCSRFHG  120
LQEFDETKRS CRKRLAGHNQ RRRKSSSDVH GGTST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140145QRRRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.12e-39SBP family protein