PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001872.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 302aa    MW: 32480 Da    PI: 6.7728
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17206242135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCgt++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  XP_023001872.1 206 CTNCGTSSmaTPMMRRGPSGPRSLCNACGLFWANRGT 242
                     *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MYGRPQPLTV GDQIASVPDC GDGGEPLDNR LVRYGAHALE DGAGVGGMIE DLNPDAVYAS  60
AGDGSDMAIQ RSDGSSQLTL SFRGQVYLFD AVSPEKVQAV LLLLGGSELS SGQQSVDLVT  120
QSQRNAVDFP GRSGQPQRAA SLNRFRQKRK ERCFDKKVRY GVRQEVAFRM QRNKGQFTSS  180
KKPDGSYSHG SVSEQGQEES PLETLCTNCG TSSMATPMMR RGPSGPRSLC NACGLFWANR  240
GTLRDLSKRS QDHRVTPAGQ FESDAAAAAA VKEDLDCRQG THAHSDLVSF SNGDNSALMA  300
EH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.23e-80GATA family protein