PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002000.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 394aa MW: 44419.2 Da PI: 8.0693

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	67.8	1.5e-21	32	112	11	97
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++++ lvlp+kfa+ ++kk+ + t+tl+ +sg +W+v l + ++++ +++ GW+eFvka+ L+++D +vF+++g s+f v vf XP_023002000.1 32 GSEQKLVLPNKFAN--NLKKKLPSTVTLKGPSGATWDVGL--SANDDKLYFKHGWQEFVKAHSLEQNDLLVFRYNGASQF--DVLVF 112 56778*****94..45566999************..*******************************99999..66666 PP
2	B3	42.1	1.6e-13	275	371	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+ ++ ps+v ++ l +p + ++++ + ++++++ ++ + +W k++++ +++ lt+GWk+F+ +n+L+e D++vF+ + ++ l XP_023002000.1 275 FKVIMRPSHVYRRFYLFIPTQWVTKNLSL--CNQDVI-LHLGNDEWPAKFSFTASRQCGGLTSGWKHFAIDNNLEEFDVCVFEPVpKTsGPVVLE 366 778899******************544..444555.5678899999999977777777*********************764444555566 PP EEEE- CS B3 94 vkvfr 98 vk+fr XP_023002000.1 367 VKIFR 371 66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDKVSDSSNK WAEDIYWSHF QFTHFYQILA GGSEQKLVLP NKFANNLKKK LPSTVTLKGP 60 SGATWDVGLS ANDDKLYFKH GWQEFVKAHS LEQNDLLVFR YNGASQFDVL VFDWKSFCEK 120 EASYFVKICE HTNSDTGHKA KRKFGEPTLD SFDVAANNGA ECASSENNLH DDSMERMIQD 180 VVSKATNLNG QPEVFSAQPI RTIRTRRRKE TPKSAAVMTP TPAPVQLSDS DEEATPVKKT 240 GSYAEQYVSN RRAITEEDKN NALKLAEAAS SNAGFKVIMR PSHVYRRFYL FIPTQWVTKN 300 LSLCNQDVIL HLGNDEWPAK FSFTASRQCG GLTSGWKHFA IDNNLEEFDV CVFEPVPKTS 360 GPVVLEVKIF RVVEDVIPLT RVSAKCNRKL IKAN

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDKVSDSSNK WAEDIYWSHF QFTHFYQILA GGSEQKLVLP NKFANNLKKK LPSTVTLKGP  60
SGATWDVGLS ANDDKLYFKH GWQEFVKAHS LEQNDLLVFR YNGASQFDVL VFDWKSFCEK  120
EASYFVKICE HTNSDTGHKA KRKFGEPTLD SFDVAANNGA ECASSENNLH DDSMERMIQD  180
VVSKATNLNG QPEVFSAQPI RTIRTRRRKE TPKSAAVMTP TPAPVQLSDS DEEATPVKKT  240
GSYAEQYVSN RRAITEEDKN NALKLAEAAS SNAGFKVIMR PSHVYRRFYL FIPTQWVTKN  300
LSLCNQDVIL HLGNDEWPAK FSFTASRQCG GLTSGWKHFA IDNNLEEFDV CVFEPVPKTS  360
GPVVLEVKIF RVVEDVIPLT RVSAKCNRKL IKAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	5e-75	B3 family protein