PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002015.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 230aa MW: 25620.5 Da PI: 9.2032

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	7.7e-19	37	82	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l+++v ++G+++W++I+r++ gR++k+c++rw + XP_023002015.1 37 KGPWSAEEDRILIHLVDRYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 82 79***************************9.*********985 PP
2	Myb_DNA-binding	53	8e-17	91	133	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_023002015.1 91 PFSATEDETILAAHARFGNR-WATIARLLP-GRTDNAVKNHWNST 133 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MTTASSSSSS SSSSSSSSTS SGTSFSAKPS RRPEKIKGPW SAEEDRILIH LVDRYGPRNW 60 SLISRYIKGR SGKSCRLRWC NQLSPNVEHR PFSATEDETI LAAHARFGNR WATIARLLPG 120 RTDNAVKNHW NSTLKRRARD QQHHLAMDGI TPDNHGNAVT DSDLKLSVPL EDDPLTALTL 180 APPGISGGVV AEERRIESFP AGFWDAMRDV VAREVREYMT TTFLENQEFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-60	MYB family protein