PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002143.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 501aa MW: 55829.6 Da PI: 5.7416

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002143.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.5e-08	439	477	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_023002143.1 439 MFQNflHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVR 477 5887779******************************88 PP
2	BELL	53.8	4.7e-18	316	378	7	70
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70 +k+++Ll+l++ +d+rY q+ ++++tv s+F+a+++l++ +++ + ++i+ +++L+++i++ XP_023002143.1 316 AKRSHLLTLQQLIDERYTQCLDEIHTVTSAFHAATDLDP-RLHSHYTYQTITSVYKSLREKITN 378 799**********************************.********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MASTNSVIVG EILPLRIPIA AGFPILLTLR ESGCPATDAD DHIVDQLGFL GSSPMFTAPQ 60 RNDLVDVSGG CLNLSSNAEF QDQLAGAIPI ASVSPVDAKD SAFSAPQFQQ LETFRTCFEH 120 SSSNASNSSF ASSLNCERDE SLCNANNEWE NGHFLYNQPI ARDNPVRSDF QTISSMENLV 180 QNGWMPSNTM NSKLWNELSL SLATSEPVIV GGTNFLDQYS QLTFSGATQP CLNNTELACN 240 SMDLSLSYSY GSSPVHPSQA ISGSRYLSVI QDILSQIASY PLESSDQVSH SSTTVGFVPF 300 SSSSLETQWP KPSGDAKRSH LLTLQQLIDE RYTQCLDEIH TVTSAFHAAT DLDPRLHSHY 360 TYQTITSVYK SLREKITNCI LAMGMHSNTV CTKEKEKSFE TTFIRKQLAL QQLKRKDNQL 420 WRAQRGLPEN SVSVLRAWMF QNFLHPYPKD TEKHLLAVKS GLTRNQVSNW FINARVRLWK 480 PMIEEMYAEM SRRKSFQNDE G

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MASTNSVIVG EILPLRIPIA AGFPILLTLR ESGCPATDAD DHIVDQLGFL GSSPMFTAPQ  60
RNDLVDVSGG CLNLSSNAEF QDQLAGAIPI ASVSPVDAKD SAFSAPQFQQ LETFRTCFEH  120
SSSNASNSSF ASSLNCERDE SLCNANNEWE NGHFLYNQPI ARDNPVRSDF QTISSMENLV  180
QNGWMPSNTM NSKLWNELSL SLATSEPVIV GGTNFLDQYS QLTFSGATQP CLNNTELACN  240
SMDLSLSYSY GSSPVHPSQA ISGSRYLSVI QDILSQIASY PLESSDQVSH SSTTVGFVPF  300
SSSSLETQWP KPSGDAKRSH LLTLQQLIDE RYTQCLDEIH TVTSAFHAAT DLDPRLHSHY  360
TYQTITSVYK SLREKITNCI LAMGMHSNTV CTKEKEKSFE TTFIRKQLAL QQLKRKDNQL  420
WRAQRGLPEN SVSVLRAWMF QNFLHPYPKD TEKHLLAVKS GLTRNQVSNW FINARVRLWK  480
PMIEEMYAEM SRRKSFQNDE G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	2e-93	TALE family protein