PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002504.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 254aa MW: 29036.8 Da PI: 6.9252

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.3	1.7e-54	15	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + + +i+evd++k+ePwdLp k+k +ekewyfF+ rd+ky++g r+nratk+gyWkatgkd+e+++ XP_023002504.1 15 LPPGFRFHPTDEELITHYLSQKVVCSGFCS-PAIAEVDLNKCEPWDLPGKAKMGEKEWYFFCVRDRKYPSGLRTNRATKAGYWKATGKDREIFK- 107 79***********************877.78***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ l+g kktLvfykgrap+g+k++Wvmheyrl XP_023002504.1 108 GRCLIGFKKTLVFYKGRAPRGQKSNWVMHEYRL 140 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MGKSEEEEDQ TVMELPPGFR FHPTDEELIT HYLSQKVVCS GFCSPAIAEV DLNKCEPWDL 60 PGKAKMGEKE WYFFCVRDRK YPSGLRTNRA TKAGYWKATG KDREIFKGRC LIGFKKTLVF 120 YKGRAPRGQK SNWVMHEYRL HAQSSAFSQE WVICRILKKR SGKKGDETGM SSRVLPPLME 180 SEASLVTCFS NSMEDRTEDV QFWSGHFEEE EDGGGGEVWR LKVGSSKGFE EAFGFGANHH 240 PSPPLDDLHC LWNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07680.1	1e-88	NAC family protein