PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002583.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 233aa    MW: 26278 Da    PI: 10.0134
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.81.3e-15131220198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v+   +l lp +f++eh  + +++  +tl de g ++ + +  rk++    +++GWk+F  a++L +gD v+F+l++   ++++v 
  XP_023002583.1 131 FIKSMVRSHVSGCFWLGLPSHFCKEHL-P-TNDGVMTLIDEGGDEYPIIYLARKTG----FSGGWKGFSVAHKLADGDAVIFQLIK--PTTCKVY 217
                     89************************4.2.33447***************555555....99*********************997..6667899 PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  XP_023002583.1 218 IFR 220
                     987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGVANLSYEE CRRKRVEENK KRMDALNLPL LSQALLDSSP SKSKSKSSPS KQAKHREMKK  60
QLVVVRRSSR VTKQPGPVYA EVLVNRVAFP KRFSSARDYP DHFFASDEAR KNAFERAERL  120
QSVLEPNYPN FIKSMVRSHV SGCFWLGLPS HFCKEHLPTN DGVMTLIDEG GDEYPIIYLA  180
RKTGFSGGWK GFSVAHKLAD GDAVIFQLIK PTTCKVYIFR VGDSKEDSDS NSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-56B3 family protein