PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002599.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LFY
Protein Properties Length: 370aa    MW: 42092.7 Da    PI: 7.3698
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY175.45e-5411481151
         FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 
                     mdpea+sa+lfkwdpr ++          a +++     +    + +l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+++sls+
  XP_023002599.1   1 MDPEALSATLFKWDPRGMVGGGGGAS-LPAPLPP----YSLRPRELELGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSH 90 
                     9***************9885544333.2333333....34667788899********************************************** PP

         FLO_LFY  96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglse 151
                     ifr++llvGeryGikaavraerrr+++e ++++rr+l+s+d+++  +ldalsqe++  
  XP_023002599.1  91 IFRWELLVGERYGIKAAVRAERRRVDDEMDSSRRRHLFSNDTHNnvVLDALSQEVSCV 148
                     *****************************9********9998887799******8654 PP
2FLO_LFY412.93.5e-126156358183386
         FLO_LFY 183 eekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekc 277
                     e +kk++k ++  kkk+ +++eed+++e+ee   ee+ + + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekc
  XP_023002599.1 156 EMRKKQRK-RNGSKKKQVMVMEEDHHDETEEGGGEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKC 249
                     33333322.2333333333444555555556666677778889**************************************************** PP

         FLO_LFY 278 PtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPt 372
                     Ptkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawrqacykplva aa qgwdida+fnahprL+iWYvPt
  XP_023002599.1 250 PTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAAAQGWDIDAIFNAHPRLAIWYVPT 344
                     *********************************************************************************************** PP

         FLO_LFY 373 kLrqLChlerskas 386
                     kLrqLCh+er++a+
  XP_023002599.1 345 KLRQLCHAERNSAK 358
                     **********9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MDPEALSATL FKWDPRGMVG GGGGASLPAP LPPYSLRPRE LELGGLEELF QAYGIRYYTA  60
AKIAELGFTV STLLDMKDEE LEDMINSLSH IFRWELLVGE RYGIKAAVRA ERRRVDDEMD  120
SSRRRHLFSN DTHNNVVLDA LSQEVSCVQQ AVAAGEMRKK QRKRNGSKKK QVMVMEEDHH  180
DETEEGGGEE EDNMEVSERQ REHPFIVTEP GEVARGKKNG LDYLFHLYEQ CREFLIQVQN  240
IAKERGEKCP TKVTNQVFRY AKKVGASYIN KPKMRHYVHC YALHCLDEEA SNALRRVFKE  300
RGENVGAWRQ ACYKPLVATA AAQGWDIDAI FNAHPRLAIW YVPTKLRQLC HAERNSAKAS  360
TSAAVNHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158164RKKQRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-109LFY family protein