PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002617.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 230aa    MW: 25790.5 Da    PI: 10.5409
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.24.6e-16127217199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+  ++ps+v+   +l lp +f+++h  +  ++  +tl de+g ++   +  rk++    l++GWk+F  a++L +gD v+F++++   ++++v 
  XP_023002617.1 127 FIRSMLPSHVSGGFWLGLPSHFCKTHLPN--RDGIVTLIDEDGDEYPTVYLARKTG----LSGGWKGFSVAHKLADGDAVIFQFIK--PTTCKVY 213
                     778899********************433..4458***************656665....***********************886..6778999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_023002617.1 214 IFRA 217
                     9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGIANLSYEE CRHKRVQENK KRMEALNLPL LSQALLHSSP SKSSPSKLAK PRVTQKQLVV  60
VRRSSRIAKQ SAPVYAEVVV NRVVIPRRIS NARDLSNRIY SSDEARKNAF ERAGRLQSGL  120
ETNYPNFIRS MLPSHVSGGF WLGLPSHFCK THLPNRDGIV TLIDEDGDEY PTVYLARKTG  180
LSGGWKGFSV AHKLADGDAV IFQFIKPTTC KVYIFRANSS RKDSESNMTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.17e-61B3 family protein