PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002798.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 285aa MW: 31284.4 Da PI: 6.1667

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.7e-33	142	199	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+ XP_023002798.1 142 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHH 199 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDRDPPPNFS TNDSSSNWTS SSLASASVDA DYLLSGDRET SILTEFGWNF DSDEVQPSRF 60 LDSDQIATDD NADFAGTSTG SLQSPDVPVP LASNPSLSSS SSGELPEKQP EIPRNKVKKK 120 GQKRIRQPRF AFMTKSEVDH LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER 180 SSEDPTVVIT TYEGQHCHHT VGFPRGGGLN LGHEAAFGTQ FSPHMAQAQF FYPDPHPPPT 240 ISPPNAPPNL PSVAPSQEEP TNSSPQVASD EGLLGDVVAP GMRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	2e-63	WRKY family protein