PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002947.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 393aa    MW: 43226.9 Da    PI: 5.1906
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.5e-052873191754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_023002947.1 287 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 319
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MAEDFQAAIC GDNWWSFSRN MMVTVGGLSP CSVGIGDLGW PPADDFLDIK PKSATDSDHN  60
NNSMLFQDYS TFQMMGFALS SSTTSDHWNQ PDGLLCGGGR GESNFNSNGI ERYKDEEITR  120
SFTSDSSFIN GLKQGDDEDY NMLEQNGLMS TTNTPTCQGL FPLDSTLYGY PHQQQQQQQP  180
PPPHAHSLFN STHPQPQPVS AALHFANNTP FWNAPTAASS THIPQGIASL LEQKSAKPIN  240
NGNCENGQEP KKGDKNSANE SVPVFKRPRI ETPSPLPTFK VRKEKLGDRV TALQQLVSPF  300
GKTDTASVLH EAIEYIKFLH DQVSVLSTPY MKSNNGITPT QQHQQVCEKE DPDCPKQDLR  360
SRGLCLVPVS STFPVSNVGT ADFWTPTFGG TFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.15e-59bHLH family protein