PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003056.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 411aa    MW: 47043.1 Da    PI: 10.0977
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.51.6e-151499898
                    -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    +++l+ + l++pkkf++++g+    s+ ++l+ ++g +W+v l  +  +++ ++l++GW +F++   L+ g  +vFk dg s+f    ++f+
  XP_023003056.1 14 HNNLEDRKLMIPKKFVKDYGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99
                    55677778***********84..58999***************..77777779************************5554555..777776 PP
2B362.18.8e-20200286188
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+ v+++++v  +  +++pk+fae+h             ++l++++gr+W + ++ r++++  +++++GWk+Fv++n LkegD+ +F+l++++
  XP_023003056.1 200 FKIVMKQPNVRGKFAMIIPKDFAEKHlpddF------GIIKLRTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDVGLFQLIKKD 286
                     677899999999**************64321......26***************775444446*************************99754 PP
3B340.64.6e-13317403899
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     +  +k+  l +p  fa++h +    s +l++ +   r+W v l  r++++++ l++GW  F  +ngL++gD+++F+++++++  ++v++f++
  XP_023003056.1 317 NRRHKKFVLNIPMVFAKAHFSTDMLSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 403
                     5667788899*********76766766666554...*******..*******************************9987666678888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DYGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LHDSRAEFTM  120
EDEDSDENTE SSPQRLSKRK NNASVPSPPQ SRKKMKPEEG CLIMKNMPKT EAGVSSRRQQ  180
FVNKPEAAQR LTSKSDKPSF KIVMKQPNVR GKFAMIIPKD FAEKHLPDDF GIIKLRTPNG  240
RKWPLLYKRR RNQENFVYFS SGWKRFVEEN VLKEGDVGLF QLIKKDIFSF TKLQDTPPFA  300
SPPTKTRNPC FKANILNRRH KKFVLNIPMV FAKAHFSTDM LSAKLQVGNR QWIVALRQYG  360
SSVRLSAGWC LFYGDNGLED GDSCLFEMVD TKNCVFKVTI FKHVSSSASM D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-31B3 family protein