PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003057.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 398aa MW: 45625.4 Da PI: 10.1157

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.6	1.5e-15	14	99	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l+ + l++pkkf++++g+ s+ ++l+ ++g +W+v l + +++ ++l++GW +F++ L+ g +vFk dg s+f ++f+ XP_023003057.1 14 HNNLEDRKLMIPKKFVKDYGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99 55677778*********84..58999***********..77777779**********************5554555..777776 PP
2	B3	62.2	8.3e-20	187	273	1	88
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+++++v + +++pk+fae+h ++l++++gr+W + ++ r++++ +++++GWk+Fv++n LkegD+ +F+l++++ XP_023003057.1 187 FKIVMKQPNVRGKFAMIIPKDFAEKHlpddF------GIIKLRTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDVGLFQLIKKD 273 677899999999************64321......26***********775444446***********************99754 PP
3	B3	40.7	4.3e-13	304	390	8	99
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +k+ l +p fa++h + s +l++ + r+W v l r++++++ l++GW F +ngL++gD+++F+++++++ ++v++f++ XP_023003057.1 304 NRRHKKFVLNIPMVFAKAHFSTDMLSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 390 5667788899*******76766766666554...***..*****************************9987666678888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DYGELLSTSV RLKLPDGMEW KVGLTTAPNG 60 VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LHDSRAEFTM 120 EDEDSDENTE SSPQRLSKRK NNASVPSPPQ SRKKMKPEEG VSSRRQQFVN KPEAAQRLTS 180 KSDKPSFKIV MKQPNVRGKF AMIIPKDFAE KHLPDDFGII KLRTPNGRKW PLLYKRRRNQ 240 ENFVYFSSGW KRFVEENVLK EGDVGLFQLI KKDIFSFTKL QDTPPFASPP TKTRNPCFKA 300 NILNRRHKKF VLNIPMVFAK AHFSTDMLSA KLQVGNRQWI VALRQYGSSV RLSAGWCLFY 360 GDNGLEDGDS CLFEMVDTKN CVFKVTIFKH VSSSASMD

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MAASSPQFFR IVLHNNLEDR KLMIPKKFVK DYGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI LHDSRAEFTM  120
EDEDSDENTE SSPQRLSKRK NNASVPSPPQ SRKKMKPEEG VSSRRQQFVN KPEAAQRLTS  180
KSDKPSFKIV MKQPNVRGKF AMIIPKDFAE KHLPDDFGII KLRTPNGRKW PLLYKRRRNQ  240
ENFVYFSSGW KRFVEENVLK EGDVGLFQLI KKDIFSFTKL QDTPPFASPP TKTRNPCFKA  300
NILNRRHKKF VLNIPMVFAK AHFSTDMLSA KLQVGNRQWI VALRQYGSSV RLSAGWCLFY  360
GDNGLEDGDS CLFEMVDTKN CVFKVTIFKH VSSSASMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	5e-31	B3 family protein