PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003130.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 655aa MW: 71682 Da PI: 5.1184

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.6e-33	222	279	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C vkkkvers d++++ei+Y+g Hnh+k XP_023003130.1 222 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCIVKKKVERSL-DGQITEIIYTGAHNHSK 279 7**************************************.*************85 PP
2	WRKY	102.3	2.8e-32	444	500	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+++d k+v++tYeg+Hnh XP_023003130.1 444 EDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCSVRKHVERASHDLKCVITTYEGKHNH 500 8******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MEVYGEHRAS KFGDDDVLVD VNGGSLADRR ASKRGRNGFN IAMARCPLGS SMVRSPFLTI 60 PSGFSPTVLL DSPIMLLNTH DILSPTTGNF PIHSIKDENS LLNPIMLEDG SSYGSEDSYY 120 RFTPRGELRF ENQEGETDHR QGFESEKTLM DYELLADFPK EDCSVLEQYE LGSSSTDKNN 180 VETCLSSVTH NHDIEQPPPP PPPLETEHKG SYVPVGMLKT SEDGYNWRKY GQKQVKGSEY 240 PRSYYKCTHP NCIVKKKVER SLDGQITEII YTGAHNHSKP DPTRRALLGS VLAPDDAPDT 300 GEGGGSRAKL EGGLPWRNSP YGVKDWSVDG LERTSSVSAV TELSEPLYGK TVGGFESIET 360 PELSSTFVSH DDDDGGGGGG GGSGGGGNDD DELTNQGSIS ADDAEPELKR RRKEGISMET 420 SLGSRSVREQ RVVVQIETEF DILEDGYRWR KYGQKVVKGN PNPRSYYKCT STGCSVRKHV 480 ERASHDLKCV ITTYEGKHNH LVPAARNSSS SSSSSSSSSS SSTAQASSAA ATQAAAAPTR 540 KSETQIQDLS TQFYPTPEFS SHEYQRSFGT APPFCQLKFP PLQTAFPALD FPISLPLSQN 600 LSAFQVFLAE RFLTPKQEHE EDNIYASFQA MTDTSSESSS SSVSSVYKQI MGKFP

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MEVYGEHRAS KFGDDDVLVD VNGGSLADRR ASKRGRNGFN IAMARCPLGS SMVRSPFLTI  60
PSGFSPTVLL DSPIMLLNTH DILSPTTGNF PIHSIKDENS LLNPIMLEDG SSYGSEDSYY  120
RFTPRGELRF ENQEGETDHR QGFESEKTLM DYELLADFPK EDCSVLEQYE LGSSSTDKNN  180
VETCLSSVTH NHDIEQPPPP PPPLETEHKG SYVPVGMLKT SEDGYNWRKY GQKQVKGSEY  240
PRSYYKCTHP NCIVKKKVER SLDGQITEII YTGAHNHSKP DPTRRALLGS VLAPDDAPDT  300
GEGGGSRAKL EGGLPWRNSP YGVKDWSVDG LERTSSVSAV TELSEPLYGK TVGGFESIET  360
PELSSTFVSH DDDDGGGGGG GGSGGGGNDD DELTNQGSIS ADDAEPELKR RRKEGISMET  420
SLGSRSVREQ RVVVQIETEF DILEDGYRWR KYGQKVVKGN PNPRSYYKCT STGCSVRKHV  480
ERASHDLKCV ITTYEGKHNH LVPAARNSSS SSSSSSSSSS SSTAQASSAA ATQAAAAPTR  540
KSETQIQDLS TQFYPTPEFS SHEYQRSFGT APPFCQLKFP PLQTAFPALD FPISLPLSQN  600
LSAFQVFLAE RFLTPKQEHE EDNIYASFQA MTDTSSESSS SSVSSVYKQI MGKFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26440.1	1e-69	WRKY family protein