PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003146.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 248aa MW: 28529.4 Da PI: 10.3158

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.5	2.7e-31	35	84	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_023003146.1 35 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 84 79***********************************************8 PP
2	K-box	112.7	3.6e-37	105	198	8	99
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++e++++ +qqe+akL+ +i nLq+++R++lGe+L+sLs+k+L++Le++Lek++++iRskKnell+++ie+++k+e +l+++n+ Lr+k+ XP_023003146.1 105 TgsTSETNTQFYQQEAAKLRVQIGNLQNSNRNMLGESLSSLSVKDLKSLESKLEKGISRIRSKKNELLFAEIEYMRKREFDLHNNNQLLRAKIV 198 135899**************************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MTDLLGFGLG KKTTRGERMS DSPQRKMGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE 60 LSVLCDAEVA LIVFSTRGRL YEYANNSVKT TIDRYKKASS NSPNTGSTSE TNTQFYQQEA 120 AKLRVQIGNL QNSNRNMLGE SLSSLSVKDL KSLESKLEKG ISRIRSKKNE LLFAEIEYMR 180 KREFDLHNNN QLLRAKIVES ERNVNMMGGG EFELMQSHPY DPRDFFQVNG LQHNQQYPRQ 240 DNMSLQLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	3e-99	MIKC_MADS family protein