PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003329.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 619aa MW: 66665.8 Da PI: 7.4469

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003329.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.4e-31	347	405	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_023003329.1 347 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 405 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MGKGWGLTLR DSDHSIGFFS NKPPPPTVNS FQSVMFQGID FPGKLGRTDD HHHHDKPALP 60 LPDHTRLAVN EVDFFSDKER VVDDRLDEDS KPPVHIIATA VNKGHNNFTA PTTAFNRVNT 120 GLHLLTANTG SDQSTVDDGI SSDGEDKRAK SELAQLQVEL QRMNAENHKL RDMLSHVRNN 180 YTTLQMHIST FMQQQQQQNQ ALESGHERQP TEKHDEVGKV VIPRQFMDLG PCGKTGEGDR 240 ELFHSSSDER TGSGSPLNNT KTGSKKSTGR DQEMGPSDQE NSNLRSDGKR SMGRDESPES 300 ESHGWGGPNK SPRLNPSSKP LDQQSTEATM RKARVSVRAR SEAPMISDGC QWRKYGQKMA 360 KGNPCPRAYY RCTMAVGCPV RKQVQRCAED TTILITTYEG NHNHPLPPAA MAMASTTTAA 420 ASMLLSGSMS SADHNLMNPS LLARAILPCS SSMATISASA PFPTITLDLT HTPNPLQFQR 480 PAPTPFHVPF EAGQPPSAAA QLPQVLGQVL YNQSKFSGLQ LSHEMGANSS HLGHHQISQP 540 AAASSQPSGA SFADTLSAAT AAITADPNFT AALAAAISSI IGGGHSNNNN TTPTNTTSTS 600 NNNGSSNNNS SKISSFPGK

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MGKGWGLTLR DSDHSIGFFS NKPPPPTVNS FQSVMFQGID FPGKLGRTDD HHHHDKPALP  60
LPDHTRLAVN EVDFFSDKER VVDDRLDEDS KPPVHIIATA VNKGHNNFTA PTTAFNRVNT  120
GLHLLTANTG SDQSTVDDGI SSDGEDKRAK SELAQLQVEL QRMNAENHKL RDMLSHVRNN  180
YTTLQMHIST FMQQQQQQNQ ALESGHERQP TEKHDEVGKV VIPRQFMDLG PCGKTGEGDR  240
ELFHSSSDER TGSGSPLNNT KTGSKKSTGR DQEMGPSDQE NSNLRSDGKR SMGRDESPES  300
ESHGWGGPNK SPRLNPSSKP LDQQSTEATM RKARVSVRAR SEAPMISDGC QWRKYGQKMA  360
KGNPCPRAYY RCTMAVGCPV RKQVQRCAED TTILITTYEG NHNHPLPPAA MAMASTTTAA  420
ASMLLSGSMS SADHNLMNPS LLARAILPCS SSMATISASA PFPTITLDLT HTPNPLQFQR  480
PAPTPFHVPF EAGQPPSAAA QLPQVLGQVL YNQSKFSGLQ LSHEMGANSS HLGHHQISQP  540
AAASSQPSGA SFADTLSAAT AAITADPNFT AALAAAISSI IGGGHSNNNN TTPTNTTSTS  600
NNNGSSNNNS SKISSFPGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-133	WRKY family protein