PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003348.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 406aa MW: 45810.1 Da PI: 6.5213

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.7	1.2e-19	169	265	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l++sdv+++gr+vlpk+ aee+ + +e+++++++d s+++W++k++y +++s++yvl+ + +Fvk+ngL gD ++++ +++++ XP_023003348.1 169 KKELKNSDVGSLGRIVLPKREAEENlpFLTDKEGMQIVIRDvNSNKKWSMKYKYwaNNRSRMYVLE-STGDFVKQNGLMMGDLITLYE--DDSKN 260 6899*********************55566899**8888****9888888889999.9*****************3..34444 PP .EEEE CS B3 92 lvvkv 96 ++v++ XP_023003348.1 261 FYVTI 265 47765 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MDDDDEDHRL RLRRNHRHRH NLNLPPFPPT TALSPPPPPQ NSPVPILPHP PLGFSLRTPQ 60 SYFVPPSLVS YGFPIENDPI NPLLPKDDGR RGLDAWSTKV ARSKRRLARQ RSLSVTKPPS 120 SSSSSSGFAG SSDHHSKGIT VTPSQPNRTH NLNLSTLSTP DKVLRILLKK ELKNSDVGSL 180 GRIVLPKREA EENLPFLTDK EGMQIVIRDV NSNKKWSMKY KYWANNRSRM YVLESTGDFV 240 KQNGLMMGDL ITLYEDDSKN FYVTIDKGEK HLIRDGNEEK KKEAAAAAAT ASAYPNMNIK 300 DEEEDDNLAL LIEQLKHKSE DDELPQSPCA TSLLLSRSYF ERGTYTGAEK GNDNHNNHND 360 NNDNNDNDNN GKEVEGFEDC FGDLEILPEV SGFKFPILDY LRNDRI

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MDDDDEDHRL RLRRNHRHRH NLNLPPFPPT TALSPPPPPQ NSPVPILPHP PLGFSLRTPQ  60
SYFVPPSLVS YGFPIENDPI NPLLPKDDGR RGLDAWSTKV ARSKRRLARQ RSLSVTKPPS  120
SSSSSSGFAG SSDHHSKGIT VTPSQPNRTH NLNLSTLSTP DKVLRILLKK ELKNSDVGSL  180
GRIVLPKREA EENLPFLTDK EGMQIVIRDV NSNKKWSMKY KYWANNRSRM YVLESTGDFV  240
KQNGLMMGDL ITLYEDDSKN FYVTIDKGEK HLIRDGNEEK KKEAAAAAAT ASAYPNMNIK  300
DEEEDDNLAL LIEQLKHKSE DDELPQSPCA TSLLLSRSYF ERGTYTGAEK GNDNHNNHND  360
NNDNNDNDNN GKEVEGFEDC FGDLEILPEV SGFKFPILDY LRNDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	9e-44	B3 family protein