PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003418.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 208aa    MW: 23738.5 Da    PI: 5.6265
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20133181355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+W+AeIrdp+    r +r++lg+f+tae+Aa+a+++a+ +++g
  XP_023003418.1 133 FRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFDTAEQAARAYDRAAIEFRG 181
                     8*******.**********82....48***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSGSSGDLDS VPFHSTCKLA VEEEHSIMVS ALTHVVSDGR IGLTHTQYQL LAAFDDAQLP  60
AIELWFPSGD TCEVCRIVGC LGCNYFQDGN YNHNHNHNQI QNVVPVEEDE EKDQDEEKKI  120
IVGNKKRRMK RTFRGVRQRP WGKWAAEIRD PRRATRVWLG TFDTAEQAAR AYDRAAIEFR  180
GDKAKLNFPA SDYQTTEQEE KPKLEIQE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124131NKKRRMKR
2125130KKRRMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-34ERF family protein