PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003419.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 249aa    MW: 27255.1 Da    PI: 6.2903
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.33.8e-34103160259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK+vk+s fprsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  XP_023003419.1 103 EDGYRWRKYGQKTVKNSVFPRSYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHP 160
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MSDEMFRDLF FSNPFRDGGF GDSETARNFG VSNEISGTPM NSCGSLSSSD AGAEEDGSGK  60
EKEKAMKDME DGGESSKAAG KAKKKEREPR FAFMTKTQID HLEDGYRWRK YGQKTVKNSV  120
FPRSYYRCTT PNCGVKKRVE RSFQDPSIVI TTYEGQHNHP IAATLRGNLS AAAAFPQSML  180
EPMPVVGGAG FLPKPLSDPS GNSQVVGGGG GGYVYSQSSF GYPYNEQQSE YEVLQDIFPS  240
PSSFFNRQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.19e-48WRKY family protein