PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003422.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 898aa MW: 99318.6 Da PI: 6.6563

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.4e-18	349	448	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ +++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_023003422.1 349 FEKMLSASDAGRIGRLVLPKKCAEAYfpSISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-PEGK 441 89************************666677788***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_023003422.1 442 LVMGFRK 448 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MSSAVTAASS SSSSLSTKPC YNSDCKELRP DRSRKGWRLR TGDFAELCDR CASAYEEGRF 60 CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPVWPP 120 SLLFHSALPD RLKDLSVKNW SQLAGSGPVP WRQAPSMFNS SLPSGELHHR APYEVDISAA 180 LNKLNTSERL PISLEKRKNE DFSERFSNGS LRQCGQDLCE NGTAGGINCE DKPSSCSSIP 240 QQSSFVKEDT CTTQYGLNVP YAPPNEPSTR SRMSGTHLRP TPPSPLPKQV HSNLQNGAEP 300 SSETQLRNGR PRGDSRGRNY LLPRYWPRFT DQELQQISVD SNSVITPLFE KMLSASDAGR 360 IGRLVLPKKC AEAYFPSISQ PEGLPLKVQD AKGKEWIFQF RFWPNNNSRM YVLEGVTPCI 420 QSMQLQAGDI VTFSRLEPEG KLVMGFRKAS TAADQENETN KTKNGAPAHG DAELADPNSW 480 TKVDKSGYIA KEVLGVKPSI SRKRKNSTLG SKSKRLRIEN EDMIELKITW EEAQGLLRPP 540 PNQLPNIVVI EGFEFEEYED APVLGKPTII PPDNTCERIQ WIQCEDCLKW RKLPASALLP 600 SKWICSDNSW DPERSFCSAA QELSTEKLEE LLSPSNSAAV QKMKTAKLEP DNVEALEGLD 660 TLANLAILEE GEASQAPGQA TTKHPRHRPG CSCIVCIQPP SGKGPKHKQT CTCNVCLTVK 720 RRFRTLMLRR EKKQSEKEAE TTRQRHQFQD EMFLDRSMDD ESLTFSNTGP SKLIVEGKIT 780 DGSDEDPNRN KPSTSPFKGQ IDLNMQPERE EELSPGSDSG SMMKVLQDTG DRFLEQQRSN 840 SGGAVSSSSD PLEPGGEREH RVENSSNVID LGSSNLDADK DHPGTLSFNA SASMSATG

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MSSAVTAASS SSSSLSTKPC YNSDCKELRP DRSRKGWRLR TGDFAELCDR CASAYEEGRF  60
CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPVWPP  120
SLLFHSALPD RLKDLSVKNW SQLAGSGPVP WRQAPSMFNS SLPSGELHHR APYEVDISAA  180
LNKLNTSERL PISLEKRKNE DFSERFSNGS LRQCGQDLCE NGTAGGINCE DKPSSCSSIP  240
QQSSFVKEDT CTTQYGLNVP YAPPNEPSTR SRMSGTHLRP TPPSPLPKQV HSNLQNGAEP  300
SSETQLRNGR PRGDSRGRNY LLPRYWPRFT DQELQQISVD SNSVITPLFE KMLSASDAGR  360
IGRLVLPKKC AEAYFPSISQ PEGLPLKVQD AKGKEWIFQF RFWPNNNSRM YVLEGVTPCI  420
QSMQLQAGDI VTFSRLEPEG KLVMGFRKAS TAADQENETN KTKNGAPAHG DAELADPNSW  480
TKVDKSGYIA KEVLGVKPSI SRKRKNSTLG SKSKRLRIEN EDMIELKITW EEAQGLLRPP  540
PNQLPNIVVI EGFEFEEYED APVLGKPTII PPDNTCERIQ WIQCEDCLKW RKLPASALLP  600
SKWICSDNSW DPERSFCSAA QELSTEKLEE LLSPSNSAAV QKMKTAKLEP DNVEALEGLD  660
TLANLAILEE GEASQAPGQA TTKHPRHRPG CSCIVCIQPP SGKGPKHKQT CTCNVCLTVK  720
RRFRTLMLRR EKKQSEKEAE TTRQRHQFQD EMFLDRSMDD ESLTFSNTGP SKLIVEGKIT  780
DGSDEDPNRN KPSTSPFKGQ IDLNMQPERE EELSPGSDSG SMMKVLQDTG DRFLEQQRSN  840
SGGAVSSSSD PLEPGGEREH RVENSSNVID LGSSNLDADK DHPGTLSFNA SASMSATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-155	B3 family protein