PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003550.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 328aa MW: 36998.6 Da PI: 6.5753

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.6e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l +++++ g +W++++++ g+ R++k+c++rw +yl XP_023003550.1 14 RGLWSPEEDEKLMKCIRKIEGQaCWSRVPKMAGLDRCGKSCRLRWINYL 62 788***************99***********************97 PP
2	Myb_DNA-binding	51.2	2.8e-16	68	110	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ ++d+++ lG++ W+ Ia++++ gRt++++k++w+ XP_023003550.1 68 RGCFSAEEERTIIDVHRILGNR-WAQIAKHLP-GRTDNEIKNFWN 110 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MGHHSCCTKV KVKRGLWSPE EDEKLMKCIR KIEGQACWSR VPKMAGLDRC GKSCRLRWIN 60 YLRPDLKRGC FSAEEERTII DVHRILGNRW AQIAKHLPGR TDNEIKNFWN SSIKKKLLAL 120 GLDPNTHNLL PARHQQQQQQ QQHHAAAAAA ANNNNNMNAY DDHYQIIGDV VNGSYVYNSN 180 NYTWLEEQQQ QQQLQTGSSC WGAPIVPGMM NWELFESGCG IVTGSSSNNS LDCDLGMMIE 240 RERLRRMWED EEADVGALIM PLATEEAAGS VVMQSQPQPQ PHNNHTTTAA AAAAAEFKDL 300 DFYFEESAVI PNPNPNPNPI NFNSNLQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	1e-69	MYB family protein