PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023003842.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 293aa    MW: 32416 Da    PI: 8.1913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023003842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000131972341254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + +++L++A+ YI+ L
  XP_023003842.1 197 RKEKLGDRISALQRLVAPF-----GKTDTSSVLTEAIGYIQFL 234
                     7778899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MESENLQELF GGYSSLVSAP RPPLLTHECI PNTILDGNSY NNNNPYLMDQ TLPCSREHEN  60
LWFNFSSNYQ QEQPNEQQLS NLYSCVQSPT SYGGFQGLST GSNTNYYSNV FSSSSRNSTS  120
TTSTLDLLSS SSLQAADPHL GLISSGFNKK RALFGYVQDS INNNSSNKVK RPLNSSSLAK  180
KSNAHESKRS CPPLKVRKEK LGDRISALQR LVAPFGKTDT SSVLTEAIGY IQFLHDQVET  240
LSMPYLGSSQ SKPYQKLQPG STQEDGTKPR PDLRSRGLCL MPLSWASFIH GYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.17e-37bHLH family protein