PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023003850.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 422aa MW: 48215.6 Da PI: 7.2767

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023003850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.1	6e-21	201	253	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 kpr+ Wt+eLHerFv a eqL G+++ +P +il+lm+ + L++e+v+SHLQk+R XP_023003850.1 201 KPRVSWTKELHERFVVAYEQL-GEKERVPNNILKLMNDPRLSRENVASHLQKHR 253 79*****************.99999************************9 PP
2	Myb_DNA-binding	38.8	2.2e-12	203	253	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT+e++e++v a +qlG + ++ I + m+ +++++++ s++qk++ XP_023003850.1 203 RVSWTKELHERFVVAYEQLGEKerVPNNILKLMNdPRLSRENVASHLQKHR 253 679**********************************************97 PP
3	Response_reg	57.6	7.1e-20	28	136	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl +d + + ++ l q+l+k +y +v+++++ +ea++ll++++ +D+i++ + +mdG+++l++ r+ ++p ++v+a+++ e++++ + G XP_023003850.1 28 VLAIDANIVCLKYLVQLLQKCQY-KVTATTETTEAIRLLNDEKesFDIIITNVGRNDMDGFKILETVRQGI-DIPAVMVSANEQLEMVKRGVMEG 120 67788889999**********.***********777777******************9966.******************* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+ +l Kp++ +el++ XP_023003850.1 121 AEAYLLKPVSFQELRN 136 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MEEKDNGSAK ISTPENIQHD QFPIGLKVLA IDANIVCLKY LVQLLQKCQY KVTATTETTE 60 AIRLLNDEKE SFDIIITNVG RNDMDGFKIL ETVRQGIDIP AVMVSANEQL EMVKRGVMEG 120 AEAYLLKPVS FQELRNIWQH VLRRRCRKRP NPNVMEQELE QHKPIISHER ATVIDKEDDA 180 IDKNINIDSN HFDSCSSSKK KPRVSWTKEL HERFVVAYEQ LGEKERVPNN ILKLMNDPRL 240 SRENVASHLQ KHRDMLRKKA TGAGKLVGKK NCYDRNSIKA SKIQNSMNQR NNVSTIDQFQ 300 FSNLGRSSME EVQGSKNYYP VPEFKWFASN NLMSKPCDQY LGFGPSNNMN SKYPQSFGNW 360 PMDNMGEIPE EAGHLGWAFP NNNTNAGQCS QLQLVKGSSH VSLLMDDELG DIFKQFQSEE 420 AF

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MEEKDNGSAK ISTPENIQHD QFPIGLKVLA IDANIVCLKY LVQLLQKCQY KVTATTETTE  60
AIRLLNDEKE SFDIIITNVG RNDMDGFKIL ETVRQGIDIP AVMVSANEQL EMVKRGVMEG  120
AEAYLLKPVS FQELRNIWQH VLRRRCRKRP NPNVMEQELE QHKPIISHER ATVIDKEDDA  180
IDKNINIDSN HFDSCSSSKK KPRVSWTKEL HERFVVAYEQ LGEKERVPNN ILKLMNDPRL  240
SRENVASHLQ KHRDMLRKKA TGAGKLVGKK NCYDRNSIKA SKIQNSMNQR NNVSTIDQFQ  300
FSNLGRSSME EVQGSKNYYP VPEFKWFASN NLMSKPCDQY LGFGPSNNMN SKYPQSFGNW  360
PMDNMGEIPE EAGHLGWAFP NNNTNAGQCS QLQLVKGSSH VSLLMDDELG DIFKQFQSEE  420
AF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	7e-57	ARR-B family protein