PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004055.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 191aa    MW: 21517.4 Da    PI: 7.3113
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY208.72.1e-6471655170
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      ++eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++  +       + + +  +++    +    s+s+  +++
  XP_023004055.1   7 IAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDV-Q-------VPNYNLYTSSGPDFQGDFGSSSKCDNNN 93 
                     689**********************************************999999985.2.......2222222222222233333333333333 PP

           YABBY 100 klsenedeevp.rvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     k++  ++  ++ +   v+rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl
  XP_023004055.1  94 KMQIRDSTTIAaEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKAKNPEISHREAFSTAAKNWAHFPRIHFGL 165
                     333333333330334599****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MSSCIDIAPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS  60
WQDVQVPNYN LYTSSGPDFQ GDFGSSSKCD NNNKMQIRDS TTIAAEERVV NRPPEKRQRV  120
PSAYNQFIKE EIQRIKAKNP EISHREAFST AAKNWAHFPR IHFGLMFETN NQAKIDDGSE  180
RLMSMAALLN K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.12e-86YABBY family protein