PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004061.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 453aa MW: 49658.9 Da PI: 6.0122

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.4e-31	221	279	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_023004061.1 221 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 279 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MCSLFEMENL QGDLTDIVRG SRTNFGCKTE DPFSSDWIFS SEMPMNFSSS SSSSSSSSSQ 60 LQDQAAARDH QQYSFGDPFC AAAPMRDPLF QELDICGFLN GGGNLEDKSG CGGSVFVGED 120 EVMKRPSNIF SRMLQISPPP PTIPNKFPIS ASPCESPLLI PNCNSPLVPP INSELHPSAL 180 QISSPTNPPG IKRRKSQARK VVCVPAPVAA TSRPNGEVIP SDLWAWRKYG QKPIKGSPYP 240 RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS SRSQQSKNNT 300 PNSSRLSSAS LPQKPTTAQE GPQKNNQHPN NNDNNGARSS ATSNHVKQEP PEEIEKPFGT 360 EAEGDQLSEG FPYRVAMAMA IHDNQSDDFF ADLEELQTDP SHLLFTQPQK LHQTQGSGGL 420 DDVVAFNNLF DWAAEDNNHS FQEPPTGSKR GFY

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MCSLFEMENL QGDLTDIVRG SRTNFGCKTE DPFSSDWIFS SEMPMNFSSS SSSSSSSSSQ  60
LQDQAAARDH QQYSFGDPFC AAAPMRDPLF QELDICGFLN GGGNLEDKSG CGGSVFVGED  120
EVMKRPSNIF SRMLQISPPP PTIPNKFPIS ASPCESPLLI PNCNSPLVPP INSELHPSAL  180
QISSPTNPPG IKRRKSQARK VVCVPAPVAA TSRPNGEVIP SDLWAWRKYG QKPIKGSPYP  240
RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS SRSQQSKNNT  300
PNSSRLSSAS LPQKPTTAQE GPQKNNQHPN NNDNNGARSS ATSNHVKQEP PEEIEKPFGT  360
EAEGDQLSEG FPYRVAMAMA IHDNQSDDFF ADLEELQTDP SHLLFTQPQK LHQTQGSGGL  420
DDVVAFNNLF DWAAEDNNHS FQEPPTGSKR GFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	3e-81	WRKY family protein