PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004096.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 325aa MW: 35913.8 Da PI: 5.6607

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42	1.6e-13	156	202	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK++Ka+iL A+ YIk+L+ XP_023004096.1 156 DHVIAERKRREKLSQRFVALSALIPRL-----KKMDKASILGDAITYIKDLE 202 5999*********************.....9**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEISSAKWLS DMELEAPFMD DLEMNPFECT LHELGFQAFS DESYTSHTDL DHSVQTRQPC 60 EVAERPAKQP RATGSWNNSC TASMAASSSS SHVISFGNSH SSPPSNKVKP NFEMGCETNR 120 DLMSVIEQGS NCSPKSCVGM KRSAGVVNRS PLVGQDHVIA ERKRREKLSQ RFVALSALIP 180 RLKKMDKASI LGDAITYIKD LEERLKAADE ETAKATVESA VVMNRSDDLS TTDDNIWSDG 240 AIPDIEARVS GKDVLLRIHG KKCKGCVSNI LKEIEKLNLT VLNSTAMPFA NLHLLITIIA 300 QMDDDFCITV KELVQKLRQA SVEFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	166	ERKRRE
2	162	167	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	7e-46	bHLH family protein