PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004097.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 314aa MW: 34665.4 Da PI: 5.8862

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.5e-13	145	191	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK++Ka+iL A+ YIk+L+ XP_023004097.1 145 DHVIAERKRREKLSQRFVALSALIPRL-----KKMDKASILGDAITYIKDLE 191 5999*********************.....9**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MELEAPFMDD LEMNPFECTL HELGFQAFSD ESYTSHTDLD HSVQTRQPCE VAERPAKQPR 60 ATGSWNNSCT ASMAASSSSS HVISFGNSHS SPPSNKVKPN FEMGCETNRD LMSVIEQGSN 120 CSPKSCVGMK RSAGVVNRSP LVGQDHVIAE RKRREKLSQR FVALSALIPR LKKMDKASIL 180 GDAITYIKDL EERLKAADEE TAKATVESAV VMNRSDDLST TDDNIWSDGA IPDIEARVSG 240 KDVLLRIHGK KCKGCVSNIL KEIEKLNLTV LNSTAMPFAN LHLLITIIAQ MDDDFCITVK 300 ELVQKLRQAS VEFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	155	ERKRRE
2	151	156	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	7e-46	bHLH family protein