PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004478.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 715aa MW: 78087.7 Da PI: 10.5044

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.9	1.1e-08	15	64	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwq 45 W t+E++ll+ av ++G ++W+++a +++ t+ +c ++++ XP_023004478.1 15 TWGTWEELLLASAVMRHGFKDWNSVAMEVQarsslphPLTTASNCELKFL 64 5*****************************66666665556666666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MAEDKERESG QSIATWGTWE ELLLASAVMR HGFKDWNSVA MEVQARSSLP HPLTTASNCE 60 LKFLDLKRRF TTFQNDAVLN ENGAGITDNV DSAVPWVDEL RKLRVAELRR EVQNYDVSIN 120 SLQLKVKRLE EERDQGLNDS EAGTGKPDLK TEARERRSEN DKKLFGEPDH RSGSKGTVVK 180 PAAVPGEDSD REDFSVNQSN STGSKSGNRK STAENTKSET KSEFTGSCRP EPNRRAAEPS 240 GPQSDDGSTD TVVKNPTCDT SGTKKKKETK RVDNSSELAD SEAESNGGGT ATRESSEVQS 300 SASLTGRMKR RRFLRKEISG GSSGNEPRRT VAVKSRRFDE VLQMIRSHKH GSLFESRLQS 360 QETEEYKGMI RQHLDLETVQ AKLNSGSYPP SSLAFYRDLL LLCNNAVTFF PNSSKESVAA 420 RELRLLVSYE MKSMPVARVD PSPGGSSPPN PSSQSKGPDL EGSQSLPAKR KSHVPIVVCR 480 KRSKISSKLS SSGLGEKNDR TNDDEKLALD LKSSVKMAST VVEDHGTAKD SSSKIKERSI 540 TGARSMRRSN DSATNSSGPS IKKQTTNSGW KLNSANETET ATPDKKKSET VALEKKRSAA 600 DFLKRIKQNS PAETTKRNGR GGSSNKSNAA AAAAAAGEQK KGSGKNGGKE KASSIRQSNE 660 KKRLKEDPSP SKRSVGRPPK KAVEANPDPN PAPTKRAREG GGKEPLKRAR KRARR

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MAEDKERESG QSIATWGTWE ELLLASAVMR HGFKDWNSVA MEVQARSSLP HPLTTASNCE  60
LKFLDLKRRF TTFQNDAVLN ENGAGITDNV DSAVPWVDEL RKLRVAELRR EVQNYDVSIN  120
SLQLKVKRLE EERDQGLNDS EAGTGKPDLK TEARERRSEN DKKLFGEPDH RSGSKGTVVK  180
PAAVPGEDSD REDFSVNQSN STGSKSGNRK STAENTKSET KSEFTGSCRP EPNRRAAEPS  240
GPQSDDGSTD TVVKNPTCDT SGTKKKKETK RVDNSSELAD SEAESNGGGT ATRESSEVQS  300
SASLTGRMKR RRFLRKEISG GSSGNEPRRT VAVKSRRFDE VLQMIRSHKH GSLFESRLQS  360
QETEEYKGMI RQHLDLETVQ AKLNSGSYPP SSLAFYRDLL LLCNNAVTFF PNSSKESVAA  420
RELRLLVSYE MKSMPVARVD PSPGGSSPPN PSSQSKGPDL EGSQSLPAKR KSHVPIVVCR  480
KRSKISSKLS SSGLGEKNDR TNDDEKLALD LKSSVKMAST VVEDHGTAKD SSSKIKERSI  540
TGARSMRRSN DSATNSSGPS IKKQTTNSGW KLNSANETET ATPDKKKSET VALEKKRSAA  600
DFLKRIKQNS PAETTKRNGR GGSSNKSNAA AAAAAAGEQK KGSGKNGGKE KASSIRQSNE  660
KKRLKEDPSP SKRSVGRPPK KAVEANPDPN PAPTKRAREG GGKEPLKRAR KRARR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	473	KRKSH
2	707	715	KRARKRARR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	9e-99	MYB_related family protein