PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004611.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 299aa    MW: 33581.9 Da    PI: 7.7679
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.31.1e-32150205258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_023004611.1 150 EPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 205
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MPSKPGIVEQ EVVDGAKYLL QSTKYSEPWW HGVGNNTITD EDATKTSSAE YLDVTVTSAA  60
MLSQANDENT GKEVQHLKYI PFSTSPPVGE RLDPNSQMEL IGHSIVLTSY PFSDAQCCQM  120
LTSYGPQTTL PHFYGLHHAR MPLPLEMEAE PVYVNAKQYH GILRRRQSRA KAELEKKVIK  180
SRKPYLHESR HLHAMRRARG SGGRFLNTKK PNSVISNKTM EEDINSGINH VSEPVSESGS  240
NYMVANENGM KDTLDGQQKE DKEFMPQNMQ ITHAFFNGGK SNGQVYPHTI QNLLMKACR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-42NF-YA family protein