PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004712.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 271aa    MW: 31327.9 Da    PI: 5.7053
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.7e-17552148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l ++v+ +G g+W++ ar  g++R++k+c++rw++yl
   XP_023004712.1  5 KGPWTAEEDSILFNYVNSHGEGRWNAAARSAGLKRSGKSCRLRWLNYL 52
                     79********************************************97 PP
2Myb_DNA-binding51.22.8e-1658101146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l++d++ qlG++ W++Iar+++ gRt++++k++w++
   XP_023004712.1  58 RGNITLQEQLLILDLHFQLGNR-WSKIARYLP-GRTDNEIKNYWRT 101
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDVRKGPWTA EEDSILFNYV NSHGEGRWNA AARSAGLKRS GKSCRLRWLN YLRPSVKRGN  60
ITLQEQLLIL DLHFQLGNRW SKIARYLPGR TDNEIKNYWR TRVQKQARQL KYDVNSKGFR  120
DTMRYVWMPR LLERIQASTD SIPVISIAID SDVDQPPQSH LDPTHSSPSK SSWVNSHVAS  180
TTSISNSISD QVQLQVSPVS DIVENFKLID TSEKDEMVVL TDQGYDRDTM NEWIGWEESL  240
ENGLWNEQDM LFLQQQFSAQ FEFDDVTPNS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.18e-79MYB family protein