PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004765.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 475aa MW: 52561.4 Da PI: 6.7951

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	3e-09	300	347	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_023004765.1 300 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 347 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MENEFFLNAT EIPQSLMHFD SNPSMATWHH SFSSAMDVQP QQLQLHVPEF NNHCSSSHPS 60 PPDCYLNPVP QQSFQFDSAL SSMVSSPAPS NSNPTNDSFV IRELIGKLGA NSGRRISELN 120 SSSSSSSVAE FSSDPGFAER AARFSCFGSR SFNGRQLTNE FGNFRSNLSI ANEKLSRVSS 180 SPSLKALGSE TKLQEQKNNS SSQEDESSLS NPDKAISNPR KRKAISKAKL KEPNAETPEK 240 GSPKKIKAVE TKENVKTEED SKKTDADLAE EKQQKTNTNP PEPPKDYIHV RARRGQATDS 300 HSLAERVRRE KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQHQV EFLSMKLASV 360 NTTRVDFNMD SLILKQTYQS ATSLPHPIDS SASSYYGHHH HQKPSLPATS MDPLDSVSCQ 420 NLPIQLPPLS SFPLNPSQYP NFGEEDELLS IVHMGFVQNQ AQGKNYDCNL TASST

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MENEFFLNAT EIPQSLMHFD SNPSMATWHH SFSSAMDVQP QQLQLHVPEF NNHCSSSHPS  60
PPDCYLNPVP QQSFQFDSAL SSMVSSPAPS NSNPTNDSFV IRELIGKLGA NSGRRISELN  120
SSSSSSSVAE FSSDPGFAER AARFSCFGSR SFNGRQLTNE FGNFRSNLSI ANEKLSRVSS  180
SPSLKALGSE TKLQEQKNNS SSQEDESSLS NPDKAISNPR KRKAISKAKL KEPNAETPEK  240
GSPKKIKAVE TKENVKTEED SKKTDADLAE EKQQKTNTNP PEPPKDYIHV RARRGQATDS  300
HSLAERVRRE KISERMKLLQ DLVPGCNKVT GKALMLDEII NYVQSLQHQV EFLSMKLASV  360
NTTRVDFNMD SLILKQTYQS ATSLPHPIDS SASSYYGHHH HQKPSLPATS MDPLDSVSCQ  420
NLPIQLPPLS SFPLNPSQYP NFGEEDELLS IVHMGFVQNQ AQGKNYDCNL TASST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	247	RKRKAISKAKLKEPNAETPEKGSPKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48560.1	5e-77	bHLH family protein