PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004822.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 185aa    MW: 20141.8 Da    PI: 6.49
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260119.22.4e-37131131100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++C++apyf ++  +++f +vhk+FGasn +kll++lp ++r++a+ ++ yeA+ar++dP+yG+++ i++lq+q+++l+a++
  XP_023004822.1  13 PCGACKFLRRKCVNGCIFAPYFRHDLgASHFSAVHKVFGASNASKLLAHLPVSHRSQAAVTISYEAQARLQDPIYGCISQIFALQHQVMNLRAQV 107
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                     a+l+e+
  XP_023004822.1 108 AYLREQ 113
                     *99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MAASSSSSSS SPPCGACKFL RRKCVNGCIF APYFRHDLGA SHFSAVHKVF GASNASKLLA  60
HLPVSHRSQA AVTISYEAQA RLQDPIYGCI SQIFALQHQV MNLRAQVAYL REQAAQILLN  120
GYITRNPNEL LYGNSLSYSD EQLLDLQTWL LEESCSTAAP EFEPTAAPYV EMGIADSNLA  180
GDFCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.14e-59LBD family protein