PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004852.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 344aa    MW: 39002 Da    PI: 6.0826
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.25e-3184187198
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    +  + ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_023004852.1  84 FDKVVTPSDVGKLNRLVIPKQHAEKYfplnSTTNDKGLILNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFQRGvGDfAK 178
                     89*************************998434447789************************************************65577777 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                      +l++ ++ 
  XP_023004852.1 179 DRLFIDWRH 187
                     778887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDFLTKSKQE EEEEEEEEEE EEEEEEEEIP TVACDFFTNS HSQNHHHCVQ HPPNHSQNQH  60
PPMELSLRID SNNNGFAVER EHMFDKVVTP SDVGKLNRLV IPKQHAEKYF PLNSTTNDKG  120
LILNFEDRNG KPWRFRYSYW NSSQSYVMTK GWSRFVKDKK LDAGDVVSFQ RGVGDFAKDR  180
LFIDWRHRSD TSRPHPLLLL PQSLRWASDR HFILPPPPPL QPRRTHHHLY PNYALEMSNL  240
GMGSNGSNNN SSMYYFQPSI SSSTSSSLYR MRNGDGIVVN NEGCSVGINK GGSGGTTAKR  300
LRLFGVNMEC AAADGEGGGG GEHDVPNGGA SRRGKEPLSL NWDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.14e-63B3 family protein